Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Chmp7Q8R1T1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
Chmp7Q8R1T1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
Chmp7Q8R1T1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Chmp7Q8R1T1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC25.63■■□□□ 1.69
Chmp7Q8R1T1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Chmp7Q8R1T1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC25.63■■□□□ 1.69
Chmp7Q8R1T1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Chmp7Q8R1T1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Gm14281-201ENSMUST00000121700 1294 ntBASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Chmp7Q8R1T1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Chmp7Q8R1T1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Chmp7Q8R1T1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Chmp7Q8R1T1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC25.6■■□□□ 1.69
Chmp7Q8R1T1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Chmp7Q8R1T1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Chmp7Q8R1T1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Chmp7Q8R1T1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC25.59■■□□□ 1.69
Chmp7Q8R1T1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Chmp7Q8R1T1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Chmp7Q8R1T1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
Chmp7Q8R1T1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Gm27801-201ENSMUST00000184174 223 ntBASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Chmp7Q8R1T1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Chmp7Q8R1T1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC25.58■■□□□ 1.68
Chmp7Q8R1T1 Gm10571-201ENSMUST00000097869 1638 ntBASIC25.57■■□□□ 1.68
Chmp7Q8R1T1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC25.57■■□□□ 1.68
Chmp7Q8R1T1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Chmp7Q8R1T1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
Chmp7Q8R1T1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Chmp7Q8R1T1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC25.56■■□□□ 1.68
Chmp7Q8R1T1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC25.56■■□□□ 1.68
Chmp7Q8R1T1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
Chmp7Q8R1T1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Chmp7Q8R1T1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
Chmp7Q8R1T1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Chmp7Q8R1T1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Chmp7Q8R1T1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Chmp7Q8R1T1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
Chmp7Q8R1T1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Chmp7Q8R1T1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Chmp7Q8R1T1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Chmp7Q8R1T1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Chmp7Q8R1T1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Chmp7Q8R1T1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Chmp7Q8R1T1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Gm13234-201ENSMUST00000120010 747 ntBASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Reep4-203ENSMUST00000226563 1444 ntBASIC25.54■■□□□ 1.68
Chmp7Q8R1T1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Chmp7Q8R1T1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Chmp7Q8R1T1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC25.53■■□□□ 1.68
Chmp7Q8R1T1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Chmp7Q8R1T1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Chmp7Q8R1T1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC25.52■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms