Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zcchc9Q8R1J3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Zcchc9Q8R1J3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Zcchc9Q8R1J3 Gm26571-201ENSMUST00000181399 666 ntBASIC19.83■□□□□ 0.77
Zcchc9Q8R1J3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Zcchc9Q8R1J3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zcchc9Q8R1J3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Zcchc9Q8R1J3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Zcchc9Q8R1J3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Zcchc9Q8R1J3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Zcchc9Q8R1J3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Zcchc9Q8R1J3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Zcchc9Q8R1J3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Zcchc9Q8R1J3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Zcchc9Q8R1J3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.82■□□□□ 0.76
Zcchc9Q8R1J3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Zcchc9Q8R1J3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Zcchc9Q8R1J3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.81■□□□□ 0.76
Zcchc9Q8R1J3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Iqck-206ENSMUST00000208658 2891 ntBASIC19.8■□□□□ 0.76
Zcchc9Q8R1J3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Zcchc9Q8R1J3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zcchc9Q8R1J3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.77■□□□□ 0.76
Zcchc9Q8R1J3 Gm27405-201ENSMUST00000184201 112 ntBASIC19.77■□□□□ 0.76
Zcchc9Q8R1J3 Gm42642-201ENSMUST00000200683 355 ntBASIC19.77■□□□□ 0.76
Zcchc9Q8R1J3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.77■□□□□ 0.76
Zcchc9Q8R1J3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Zcchc9Q8R1J3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Zcchc9Q8R1J3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Zcchc9Q8R1J3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Zcchc9Q8R1J3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Zcchc9Q8R1J3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Zcchc9Q8R1J3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Zcchc9Q8R1J3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zcchc9Q8R1J3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Zcchc9Q8R1J3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.75■□□□□ 0.75
Zcchc9Q8R1J3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Zcchc9Q8R1J3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Zcchc9Q8R1J3 Smad6-203ENSMUST00000179458 273 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms