Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.62■□□□□ 0.57
Lin28aQ8K3Y3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lin28aQ8K3Y3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lin28aQ8K3Y3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.62■□□□□ 0.57
Lin28aQ8K3Y3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lin28aQ8K3Y3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lin28aQ8K3Y3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.62■□□□□ 0.57
Lin28aQ8K3Y3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lin28aQ8K3Y3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lin28aQ8K3Y3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lin28aQ8K3Y3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lin28aQ8K3Y3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lin28aQ8K3Y3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Lin28aQ8K3Y3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Mir6236-201ENSMUST00000184437 123 ntBASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Gm43173-201ENSMUST00000202246 593 ntBASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lin28aQ8K3Y3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lin28aQ8K3Y3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lin28aQ8K3Y3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Lin28aQ8K3Y3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Lin28aQ8K3Y3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Lin28aQ8K3Y3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lin28aQ8K3Y3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lin28aQ8K3Y3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lin28aQ8K3Y3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Lin28aQ8K3Y3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lin28aQ8K3Y3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lin28aQ8K3Y3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.58■□□□□ 0.56
Lin28aQ8K3Y3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lin28aQ8K3Y3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Lin28aQ8K3Y3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lin28aQ8K3Y3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Lin28aQ8K3Y3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lin28aQ8K3Y3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lin28aQ8K3Y3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lin28aQ8K3Y3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lin28aQ8K3Y3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lin28aQ8K3Y3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.56■□□□□ 0.56
Lin28aQ8K3Y3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
Lin28aQ8K3Y3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lin28aQ8K3Y3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lin28aQ8K3Y3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lin28aQ8K3Y3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lin28aQ8K3Y3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lin28aQ8K3Y3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms