Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rftn2Q8CHX7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rftn2Q8CHX7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rftn2Q8CHX7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rftn2Q8CHX7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.28■■□□□ 1
Rftn2Q8CHX7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.28■■□□□ 1
Rftn2Q8CHX7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rftn2Q8CHX7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rftn2Q8CHX7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rftn2Q8CHX7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rftn2Q8CHX7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rftn2Q8CHX7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.27■■□□□ 1
Rftn2Q8CHX7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rftn2Q8CHX7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Rftn2Q8CHX7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rftn2Q8CHX7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rftn2Q8CHX7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.26■□□□□ 0.99
Rftn2Q8CHX7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rftn2Q8CHX7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rftn2Q8CHX7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rftn2Q8CHX7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rftn2Q8CHX7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rftn2Q8CHX7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rftn2Q8CHX7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rftn2Q8CHX7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rftn2Q8CHX7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rftn2Q8CHX7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rftn2Q8CHX7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rftn2Q8CHX7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Rftn2Q8CHX7 Gm5874-201ENSMUST00000096101 508 ntBASIC21.22■□□□□ 0.99
Rftn2Q8CHX7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Rftn2Q8CHX7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rftn2Q8CHX7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.22■□□□□ 0.99
Rftn2Q8CHX7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Rftn2Q8CHX7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rftn2Q8CHX7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Gm10493-201ENSMUST00000097270 612 ntBASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rftn2Q8CHX7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rftn2Q8CHX7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms