Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf31Q8CCF0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Prpf31Q8CCF0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Prpf31Q8CCF0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf31Q8CCF0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Prpf31Q8CCF0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf31Q8CCF0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Prpf31Q8CCF0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf31Q8CCF0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.81■■□□□ 1.08
Prpf31Q8CCF0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.8■■□□□ 1.08
Prpf31Q8CCF0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Gm26833-201ENSMUST00000180899 440 ntBASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf31Q8CCF0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf31Q8CCF0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.78■■□□□ 1.08
Prpf31Q8CCF0 Smad6-203ENSMUST00000179458 273 ntBASIC21.78■■□□□ 1.08
Prpf31Q8CCF0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.78■■□□□ 1.08
Prpf31Q8CCF0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Prpf31Q8CCF0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.78■■□□□ 1.08
Prpf31Q8CCF0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf31Q8CCF0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.77■■□□□ 1.08
Prpf31Q8CCF0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf31Q8CCF0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf31Q8CCF0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf31Q8CCF0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf31Q8CCF0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf31Q8CCF0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Prpf31Q8CCF0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf31Q8CCF0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
Prpf31Q8CCF0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf31Q8CCF0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf31Q8CCF0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf31Q8CCF0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Prpf31Q8CCF0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Prpf31Q8CCF0 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.74■■□□□ 1.07
Prpf31Q8CCF0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Prpf31Q8CCF0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf31Q8CCF0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf31Q8CCF0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Prpf31Q8CCF0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf31Q8CCF0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf31Q8CCF0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf31Q8CCF0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf31Q8CCF0 Gm43060-201ENSMUST00000200621 289 ntBASIC21.72■■□□□ 1.07
Prpf31Q8CCF0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.72■■□□□ 1.07
Prpf31Q8CCF0 Gm40848-201ENSMUST00000221998 324 ntBASIC21.72■■□□□ 1.07
Prpf31Q8CCF0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf31Q8CCF0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf31Q8CCF0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf31Q8CCF0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf31Q8CCF0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms