Protein–RNA interactions for Protein: Q8CC27

Cacnb2, Voltage-dependent L-type calcium channel subunit beta-2, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb2Q8CC27 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacnb2Q8CC27 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacnb2Q8CC27 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacnb2Q8CC27 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.58■□□□□ 0.89
Cacnb2Q8CC27 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cacnb2Q8CC27 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacnb2Q8CC27 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacnb2Q8CC27 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacnb2Q8CC27 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacnb2Q8CC27 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacnb2Q8CC27 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacnb2Q8CC27 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Gm42642-201ENSMUST00000200683 355 ntBASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.57■□□□□ 0.88
Cacnb2Q8CC27 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Gm11421-201ENSMUST00000122124 294 ntBASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb2Q8CC27 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.55■□□□□ 0.88
Cacnb2Q8CC27 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb2Q8CC27 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb2Q8CC27 Gm7291-201ENSMUST00000199147 382 ntBASIC20.55■□□□□ 0.88
Cacnb2Q8CC27 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb2Q8CC27 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb2Q8CC27 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Cacnb2Q8CC27 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.54■□□□□ 0.88
Cacnb2Q8CC27 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.54■□□□□ 0.88
Cacnb2Q8CC27 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb2Q8CC27 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb2Q8CC27 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb2Q8CC27 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb2Q8CC27 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb2Q8CC27 Gm10849-201ENSMUST00000100397 618 ntBASIC20.53■□□□□ 0.88
Cacnb2Q8CC27 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb2Q8CC27 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb2Q8CC27 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb2Q8CC27 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.53■□□□□ 0.88
Cacnb2Q8CC27 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb2Q8CC27 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cacnb2Q8CC27 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Cacnb2Q8CC27 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb2Q8CC27 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb2Q8CC27 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb2Q8CC27 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb2Q8CC27 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb2Q8CC27 Gm42569-201ENSMUST00000200539 472 ntBASIC20.52■□□□□ 0.88
Cacnb2Q8CC27 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb2Q8CC27 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb2Q8CC27 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb2Q8CC27 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb2Q8CC27 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb2Q8CC27 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb2Q8CC27 Gm29257-201ENSMUST00000186115 639 ntBASIC20.51■□□□□ 0.87
Cacnb2Q8CC27 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb2Q8CC27 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb2Q8CC27 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cacnb2Q8CC27 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacnb2Q8CC27 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacnb2Q8CC27 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacnb2Q8CC27 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Cacnb2Q8CC27 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.5■□□□□ 0.87
Cacnb2Q8CC27 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.5■□□□□ 0.87
Cacnb2Q8CC27 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cacnb2Q8CC27 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms