Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Mir7075-201ENSMUST00000184187 82 ntBASIC23.41■■□□□ 1.34
Shisa4Q8CA71 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shisa4Q8CA71 Spcs1-204ENSMUST00000226782 949 ntBASIC23.41■■□□□ 1.34
Shisa4Q8CA71 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.41■■□□□ 1.34
Shisa4Q8CA71 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shisa4Q8CA71 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shisa4Q8CA71 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Shisa4Q8CA71 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shisa4Q8CA71 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shisa4Q8CA71 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shisa4Q8CA71 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shisa4Q8CA71 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.39■■□□□ 1.33
Shisa4Q8CA71 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.39■■□□□ 1.33
Shisa4Q8CA71 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shisa4Q8CA71 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shisa4Q8CA71 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Shisa4Q8CA71 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shisa4Q8CA71 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shisa4Q8CA71 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Shisa4Q8CA71 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.38■■□□□ 1.33
Shisa4Q8CA71 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shisa4Q8CA71 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Shisa4Q8CA71 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Shisa4Q8CA71 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Shisa4Q8CA71 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Shisa4Q8CA71 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.37■■□□□ 1.33
Shisa4Q8CA71 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Shisa4Q8CA71 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Shisa4Q8CA71 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Shisa4Q8CA71 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shisa4Q8CA71 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shisa4Q8CA71 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shisa4Q8CA71 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shisa4Q8CA71 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shisa4Q8CA71 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shisa4Q8CA71 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Shisa4Q8CA71 Gm29257-201ENSMUST00000186115 639 ntBASIC23.35■■□□□ 1.33
Shisa4Q8CA71 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Shisa4Q8CA71 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Shisa4Q8CA71 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Shisa4Q8CA71 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Shisa4Q8CA71 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shisa4Q8CA71 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.33■■□□□ 1.33
Shisa4Q8CA71 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shisa4Q8CA71 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.33■■□□□ 1.33
Shisa4Q8CA71 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.33■■□□□ 1.33
Shisa4Q8CA71 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Shisa4Q8CA71 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
Shisa4Q8CA71 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Shisa4Q8CA71 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shisa4Q8CA71 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Shisa4Q8CA71 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.3■■□□□ 1.32
Shisa4Q8CA71 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Shisa4Q8CA71 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms