Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Rtp1Q8C8C1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtp1Q8C8C1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtp1Q8C8C1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.99■■□□□ 1.27
Rtp1Q8C8C1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.99■■□□□ 1.27
Rtp1Q8C8C1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rtp1Q8C8C1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rtp1Q8C8C1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtp1Q8C8C1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Rtp1Q8C8C1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtp1Q8C8C1 Gm12527-201ENSMUST00000117967 564 ntBASIC22.98■■□□□ 1.27
Rtp1Q8C8C1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rtp1Q8C8C1 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.98■■□□□ 1.27
Rtp1Q8C8C1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtp1Q8C8C1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.98■■□□□ 1.27
Rtp1Q8C8C1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtp1Q8C8C1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtp1Q8C8C1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtp1Q8C8C1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtp1Q8C8C1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rtp1Q8C8C1 Gm8520-201ENSMUST00000186517 868 ntBASIC22.97■■□□□ 1.27
Rtp1Q8C8C1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtp1Q8C8C1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Rtp1Q8C8C1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtp1Q8C8C1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtp1Q8C8C1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
Rtp1Q8C8C1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp1Q8C8C1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp1Q8C8C1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp1Q8C8C1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp1Q8C8C1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.96■■□□□ 1.27
Rtp1Q8C8C1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp1Q8C8C1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtp1Q8C8C1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Rtp1Q8C8C1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
Rtp1Q8C8C1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
Rtp1Q8C8C1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.95■■□□□ 1.26
Rtp1Q8C8C1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtp1Q8C8C1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtp1Q8C8C1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp1Q8C8C1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp1Q8C8C1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.94■■□□□ 1.26
Rtp1Q8C8C1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp1Q8C8C1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.94■■□□□ 1.26
Rtp1Q8C8C1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.94■■□□□ 1.26
Rtp1Q8C8C1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp1Q8C8C1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtp1Q8C8C1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtp1Q8C8C1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.93■■□□□ 1.26
Rtp1Q8C8C1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rtp1Q8C8C1 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.93■■□□□ 1.26
Rtp1Q8C8C1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.93■■□□□ 1.26
Rtp1Q8C8C1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rtp1Q8C8C1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rtp1Q8C8C1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.92■■□□□ 1.26
Rtp1Q8C8C1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Rtp1Q8C8C1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.92■■□□□ 1.26
Rtp1Q8C8C1 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.92■■□□□ 1.26
Rtp1Q8C8C1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rtp1Q8C8C1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtp1Q8C8C1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtp1Q8C8C1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Rtp1Q8C8C1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtp1Q8C8C1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtp1Q8C8C1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtp1Q8C8C1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.9■■□□□ 1.26
Rtp1Q8C8C1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Rtp1Q8C8C1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rtp1Q8C8C1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rtp1Q8C8C1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rtp1Q8C8C1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.89■■□□□ 1.25
Rtp1Q8C8C1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Rtp1Q8C8C1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rtp1Q8C8C1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rtp1Q8C8C1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rtp1Q8C8C1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rtp1Q8C8C1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rtp1Q8C8C1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rtp1Q8C8C1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rtp1Q8C8C1 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.88■■□□□ 1.25
Rtp1Q8C8C1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rtp1Q8C8C1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.87■■□□□ 1.25
Rtp1Q8C8C1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtp1Q8C8C1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rtp1Q8C8C1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtp1Q8C8C1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Rtp1Q8C8C1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms