Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.2■□□□□ 0.82
Rfx6Q8C7R7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx6Q8C7R7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.19■□□□□ 0.82
Rfx6Q8C7R7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.19■□□□□ 0.82
Rfx6Q8C7R7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx6Q8C7R7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Rfx6Q8C7R7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx6Q8C7R7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx6Q8C7R7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Gm7143-201ENSMUST00000222811 859 ntBASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx6Q8C7R7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Rfx6Q8C7R7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx6Q8C7R7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx6Q8C7R7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx6Q8C7R7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx6Q8C7R7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.16■□□□□ 0.82
Rfx6Q8C7R7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx6Q8C7R7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx6Q8C7R7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx6Q8C7R7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.15■□□□□ 0.82
Rfx6Q8C7R7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx6Q8C7R7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx6Q8C7R7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx6Q8C7R7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx6Q8C7R7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx6Q8C7R7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx6Q8C7R7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx6Q8C7R7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx6Q8C7R7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rfx6Q8C7R7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rfx6Q8C7R7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx6Q8C7R7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx6Q8C7R7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx6Q8C7R7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rfx6Q8C7R7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.14■□□□□ 0.81
Rfx6Q8C7R7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx6Q8C7R7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx6Q8C7R7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx6Q8C7R7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.13■□□□□ 0.81
Rfx6Q8C7R7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx6Q8C7R7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx6Q8C7R7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Rfx6Q8C7R7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx6Q8C7R7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rfx6Q8C7R7 Gm40881-201ENSMUST00000223397 166 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms