Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim9Q8C7M3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim9Q8C7M3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trim9Q8C7M3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.08■■□□□ 1.13
Trim9Q8C7M3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim9Q8C7M3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim9Q8C7M3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trim9Q8C7M3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.08■■□□□ 1.13
Trim9Q8C7M3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trim9Q8C7M3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim9Q8C7M3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim9Q8C7M3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim9Q8C7M3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim9Q8C7M3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim9Q8C7M3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim9Q8C7M3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim9Q8C7M3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim9Q8C7M3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim9Q8C7M3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim9Q8C7M3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim9Q8C7M3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Trim9Q8C7M3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim9Q8C7M3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim9Q8C7M3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim9Q8C7M3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Trim9Q8C7M3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim9Q8C7M3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Trim9Q8C7M3 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.04■■□□□ 1.12
Trim9Q8C7M3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.04■■□□□ 1.12
Trim9Q8C7M3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim9Q8C7M3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim9Q8C7M3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim9Q8C7M3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim9Q8C7M3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim9Q8C7M3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim9Q8C7M3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim9Q8C7M3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.02■■□□□ 1.12
Trim9Q8C7M3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.01■■□□□ 1.11
Trim9Q8C7M3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.01■■□□□ 1.11
Trim9Q8C7M3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim9Q8C7M3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim9Q8C7M3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.01■■□□□ 1.11
Trim9Q8C7M3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
Trim9Q8C7M3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim9Q8C7M3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim9Q8C7M3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22■■□□□ 1.11
Trim9Q8C7M3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim9Q8C7M3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim9Q8C7M3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Trim9Q8C7M3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim9Q8C7M3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim9Q8C7M3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.99■■□□□ 1.11
Trim9Q8C7M3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim9Q8C7M3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim9Q8C7M3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim9Q8C7M3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim9Q8C7M3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Gm9847-201ENSMUST00000052528 599 ntBASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim9Q8C7M3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim9Q8C7M3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim9Q8C7M3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim9Q8C7M3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim9Q8C7M3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim9Q8C7M3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trim9Q8C7M3 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.96■■□□□ 1.11
Trim9Q8C7M3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim9Q8C7M3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms