Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cstf2tQ8C7E9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cstf2tQ8C7E9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.37■□□□□ 0.85
Cstf2tQ8C7E9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cstf2tQ8C7E9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cstf2tQ8C7E9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Cstf2tQ8C7E9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.36■□□□□ 0.85
Cstf2tQ8C7E9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf2tQ8C7E9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cstf2tQ8C7E9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf2tQ8C7E9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cstf2tQ8C7E9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf2tQ8C7E9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf2tQ8C7E9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Mir6982-201ENSMUST00000184354 68 ntBASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf2tQ8C7E9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Gm12527-201ENSMUST00000117967 564 ntBASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cstf2tQ8C7E9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cstf2tQ8C7E9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cstf2tQ8C7E9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.32■□□□□ 0.84
Cstf2tQ8C7E9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cstf2tQ8C7E9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cstf2tQ8C7E9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cstf2tQ8C7E9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.32■□□□□ 0.84
Cstf2tQ8C7E9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cstf2tQ8C7E9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cstf2tQ8C7E9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cstf2tQ8C7E9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf2tQ8C7E9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf2tQ8C7E9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf2tQ8C7E9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf2tQ8C7E9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.3■□□□□ 0.84
Cstf2tQ8C7E9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Cstf2tQ8C7E9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cstf2tQ8C7E9 Gm20760-201ENSMUST00000179197 648 ntBASIC20.3■□□□□ 0.84
Cstf2tQ8C7E9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf2tQ8C7E9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf2tQ8C7E9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.29■□□□□ 0.84
Cstf2tQ8C7E9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf2tQ8C7E9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.29■□□□□ 0.84
Cstf2tQ8C7E9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf2tQ8C7E9 Gm9988-201ENSMUST00000069786 435 ntBASIC20.29■□□□□ 0.84
Cstf2tQ8C7E9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf2tQ8C7E9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf2tQ8C7E9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf2tQ8C7E9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf2tQ8C7E9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.28■□□□□ 0.84
Cstf2tQ8C7E9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf2tQ8C7E9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf2tQ8C7E9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf2tQ8C7E9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf2tQ8C7E9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf2tQ8C7E9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf2tQ8C7E9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf2tQ8C7E9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf2tQ8C7E9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cstf2tQ8C7E9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms