Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rft1Q8C3B8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.64■□□□□ 0.41
Rft1Q8C3B8 Gm7417-201ENSMUST00000192950 473 ntBASIC17.64■□□□□ 0.41
Rft1Q8C3B8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rft1Q8C3B8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rft1Q8C3B8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Rft1Q8C3B8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Gm40881-201ENSMUST00000223397 166 ntBASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rft1Q8C3B8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rft1Q8C3B8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rft1Q8C3B8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rft1Q8C3B8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.61■□□□□ 0.41
Rft1Q8C3B8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rft1Q8C3B8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rft1Q8C3B8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rft1Q8C3B8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.6■□□□□ 0.41
Rft1Q8C3B8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rft1Q8C3B8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rft1Q8C3B8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rft1Q8C3B8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rft1Q8C3B8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.58■□□□□ 0.41
Rft1Q8C3B8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rft1Q8C3B8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rft1Q8C3B8 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.58■□□□□ 0.4
Rft1Q8C3B8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.58■□□□□ 0.4
Rft1Q8C3B8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rft1Q8C3B8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rft1Q8C3B8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Rft1Q8C3B8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rft1Q8C3B8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rft1Q8C3B8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rft1Q8C3B8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rft1Q8C3B8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.57■□□□□ 0.4
Rft1Q8C3B8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.57■□□□□ 0.4
Rft1Q8C3B8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.57■□□□□ 0.4
Rft1Q8C3B8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rft1Q8C3B8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Rft1Q8C3B8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rft1Q8C3B8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms