Protein–RNA interactions for Protein: Q8BUN5

Smad3, Mothers against decapentaplegic homolog 3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad3Q8BUN5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smad3Q8BUN5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smad3Q8BUN5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smad3Q8BUN5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smad3Q8BUN5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Smad3Q8BUN5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Smad3Q8BUN5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smad3Q8BUN5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smad3Q8BUN5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Smad3Q8BUN5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Smad3Q8BUN5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.31■■□□□ 1
Smad3Q8BUN5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smad3Q8BUN5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.3■■□□□ 1
Smad3Q8BUN5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smad3Q8BUN5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smad3Q8BUN5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Smad3Q8BUN5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Smad3Q8BUN5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smad3Q8BUN5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Smad3Q8BUN5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smad3Q8BUN5 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.3■■□□□ 1
Smad3Q8BUN5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smad3Q8BUN5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Smad3Q8BUN5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smad3Q8BUN5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smad3Q8BUN5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Smad3Q8BUN5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smad3Q8BUN5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Smad3Q8BUN5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smad3Q8BUN5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smad3Q8BUN5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Smad3Q8BUN5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smad3Q8BUN5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smad3Q8BUN5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smad3Q8BUN5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smad3Q8BUN5 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.28■■□□□ 1
Smad3Q8BUN5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smad3Q8BUN5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.28■■□□□ 1
Smad3Q8BUN5 Gm10812-201ENSMUST00000099864 546 ntBASIC21.28■■□□□ 1
Smad3Q8BUN5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smad3Q8BUN5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smad3Q8BUN5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smad3Q8BUN5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.27■■□□□ 1
Smad3Q8BUN5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Smad3Q8BUN5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Smad3Q8BUN5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smad3Q8BUN5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smad3Q8BUN5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smad3Q8BUN5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smad3Q8BUN5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smad3Q8BUN5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.24■□□□□ 0.99
Smad3Q8BUN5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smad3Q8BUN5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smad3Q8BUN5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smad3Q8BUN5 Mir6982-201ENSMUST00000184354 68 ntBASIC21.23■□□□□ 0.99
Smad3Q8BUN5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smad3Q8BUN5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smad3Q8BUN5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smad3Q8BUN5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smad3Q8BUN5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smad3Q8BUN5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.22■□□□□ 0.99
Smad3Q8BUN5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.22■□□□□ 0.99
Smad3Q8BUN5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.22■□□□□ 0.99
Smad3Q8BUN5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smad3Q8BUN5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad3Q8BUN5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smad3Q8BUN5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.2■□□□□ 0.98
Smad3Q8BUN5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.2■□□□□ 0.98
Smad3Q8BUN5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms