Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp43Q8BUM9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp43Q8BUM9 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.24■□□□□ 0.83
Usp43Q8BUM9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp43Q8BUM9 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.24■□□□□ 0.83
Usp43Q8BUM9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp43Q8BUM9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp43Q8BUM9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp43Q8BUM9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp43Q8BUM9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp43Q8BUM9 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.22■□□□□ 0.83
Usp43Q8BUM9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp43Q8BUM9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp43Q8BUM9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Usp43Q8BUM9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp43Q8BUM9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp43Q8BUM9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp43Q8BUM9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Usp43Q8BUM9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Usp43Q8BUM9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp43Q8BUM9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp43Q8BUM9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp43Q8BUM9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp43Q8BUM9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.2■□□□□ 0.82
Usp43Q8BUM9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp43Q8BUM9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp43Q8BUM9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp43Q8BUM9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp43Q8BUM9 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.18■□□□□ 0.82
Usp43Q8BUM9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.18■□□□□ 0.82
Usp43Q8BUM9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Usp43Q8BUM9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Usp43Q8BUM9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.16■□□□□ 0.82
Usp43Q8BUM9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp43Q8BUM9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp43Q8BUM9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp43Q8BUM9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp43Q8BUM9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms