Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.93■□□□□ 0.62
Cdk5rap1Q8BTW8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.93■□□□□ 0.62
Cdk5rap1Q8BTW8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cdk5rap1Q8BTW8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap1Q8BTW8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cdk5rap1Q8BTW8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.93■□□□□ 0.62
Cdk5rap1Q8BTW8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap1Q8BTW8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cdk5rap1Q8BTW8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap1Q8BTW8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Gm40848-201ENSMUST00000221998 324 ntBASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap1Q8BTW8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Cdk5rap1Q8BTW8 Notumos-201ENSMUST00000151998 2659 ntBASIC18.89■□□□□ 0.62
Cdk5rap1Q8BTW8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cdk5rap1Q8BTW8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Cdk5rap1Q8BTW8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap1Q8BTW8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap1Q8BTW8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap1Q8BTW8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap1Q8BTW8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap1Q8BTW8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk5rap1Q8BTW8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk5rap1Q8BTW8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cdk5rap1Q8BTW8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk5rap1Q8BTW8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk5rap1Q8BTW8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk5rap1Q8BTW8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 Gm11421-201ENSMUST00000122124 294 ntBASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.86■□□□□ 0.61
Cdk5rap1Q8BTW8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk5rap1Q8BTW8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Gm5874-201ENSMUST00000096101 508 ntBASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdk5rap1Q8BTW8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdk5rap1Q8BTW8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdk5rap1Q8BTW8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.83■□□□□ 0.6
Cdk5rap1Q8BTW8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdk5rap1Q8BTW8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms