Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Lig4Q8BTF7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lig4Q8BTF7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.1■□□□□ 0.97
Lig4Q8BTF7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lig4Q8BTF7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lig4Q8BTF7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.1■□□□□ 0.97
Lig4Q8BTF7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lig4Q8BTF7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Lig4Q8BTF7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.1■□□□□ 0.97
Lig4Q8BTF7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lig4Q8BTF7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lig4Q8BTF7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lig4Q8BTF7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lig4Q8BTF7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.08■□□□□ 0.97
Lig4Q8BTF7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lig4Q8BTF7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lig4Q8BTF7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lig4Q8BTF7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Lig4Q8BTF7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lig4Q8BTF7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lig4Q8BTF7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Lig4Q8BTF7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lig4Q8BTF7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lig4Q8BTF7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lig4Q8BTF7 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.07■□□□□ 0.96
Lig4Q8BTF7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Lig4Q8BTF7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Lig4Q8BTF7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
Lig4Q8BTF7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.07■□□□□ 0.96
Lig4Q8BTF7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lig4Q8BTF7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Lig4Q8BTF7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lig4Q8BTF7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lig4Q8BTF7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lig4Q8BTF7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lig4Q8BTF7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lig4Q8BTF7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lig4Q8BTF7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lig4Q8BTF7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lig4Q8BTF7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lig4Q8BTF7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lig4Q8BTF7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lig4Q8BTF7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.04■□□□□ 0.96
Lig4Q8BTF7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lig4Q8BTF7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lig4Q8BTF7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lig4Q8BTF7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lig4Q8BTF7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms