Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Rps24-207ENSMUST00000224568 714 ntBASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ppp1r3eQ8BRJ4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ppp1r3eQ8BRJ4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ppp1r3eQ8BRJ4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gm45444-201ENSMUST00000211394 898 ntBASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ppp1r3eQ8BRJ4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ppp1r3eQ8BRJ4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ppp1r3eQ8BRJ4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ppp1r3eQ8BRJ4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.63■□□□□ 0.57
Ppp1r3eQ8BRJ4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ppp1r3eQ8BRJ4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ppp1r3eQ8BRJ4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.62■□□□□ 0.57
Ppp1r3eQ8BRJ4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ppp1r3eQ8BRJ4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ppp1r3eQ8BRJ4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.62■□□□□ 0.57
Ppp1r3eQ8BRJ4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ppp1r3eQ8BRJ4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ppp1r3eQ8BRJ4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ppp1r3eQ8BRJ4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ppp1r3eQ8BRJ4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.61■□□□□ 0.57
Ppp1r3eQ8BRJ4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.61■□□□□ 0.57
Ppp1r3eQ8BRJ4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ppp1r3eQ8BRJ4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gm7143-201ENSMUST00000222811 859 ntBASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ppp1r3eQ8BRJ4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ppp1r3eQ8BRJ4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ppp1r3eQ8BRJ4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ppp1r3eQ8BRJ4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ppp1r3eQ8BRJ4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.59■□□□□ 0.57
Ppp1r3eQ8BRJ4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ppp1r3eQ8BRJ4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ppp1r3eQ8BRJ4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms