Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.19■□□□□ 0.98
Rd3Q8BRE0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.18■□□□□ 0.98
Rd3Q8BRE0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rd3Q8BRE0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rd3Q8BRE0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.18■□□□□ 0.98
Rd3Q8BRE0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rd3Q8BRE0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rd3Q8BRE0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rd3Q8BRE0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Gm10849-201ENSMUST00000100397 618 ntBASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.17■□□□□ 0.98
Rd3Q8BRE0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rd3Q8BRE0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rd3Q8BRE0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rd3Q8BRE0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.15■□□□□ 0.98
Rd3Q8BRE0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rd3Q8BRE0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rd3Q8BRE0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rd3Q8BRE0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rd3Q8BRE0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rd3Q8BRE0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rd3Q8BRE0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
Rd3Q8BRE0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rd3Q8BRE0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.14■□□□□ 0.97
Rd3Q8BRE0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Rd3Q8BRE0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.14■□□□□ 0.97
Rd3Q8BRE0 Gm37179-201ENSMUST00000194862 823 ntBASIC21.14■□□□□ 0.97
Rd3Q8BRE0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Rd3Q8BRE0 Gm9988-201ENSMUST00000069786 435 ntBASIC21.14■□□□□ 0.97
Rd3Q8BRE0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.14■□□□□ 0.97
Rd3Q8BRE0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rd3Q8BRE0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rd3Q8BRE0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rd3Q8BRE0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rd3Q8BRE0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Rd3Q8BRE0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rd3Q8BRE0 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.13■□□□□ 0.97
Rd3Q8BRE0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rd3Q8BRE0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rd3Q8BRE0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.13■□□□□ 0.97
Rd3Q8BRE0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rd3Q8BRE0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rd3Q8BRE0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rd3Q8BRE0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rd3Q8BRE0 AV356131-201ENSMUST00000206201 750 ntBASIC21.12■□□□□ 0.97
Rd3Q8BRE0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.12■□□□□ 0.97
Rd3Q8BRE0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rd3Q8BRE0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.12■□□□□ 0.97
Rd3Q8BRE0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rd3Q8BRE0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rd3Q8BRE0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rd3Q8BRE0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rd3Q8BRE0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rd3Q8BRE0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rd3Q8BRE0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rd3Q8BRE0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rd3Q8BRE0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rd3Q8BRE0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.1■□□□□ 0.97
Rd3Q8BRE0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rd3Q8BRE0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.1■□□□□ 0.97
Rd3Q8BRE0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.1■□□□□ 0.97
Rd3Q8BRE0 Gm10033-202ENSMUST00000211874 928 ntBASIC21.1■□□□□ 0.97
Rd3Q8BRE0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rd3Q8BRE0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rd3Q8BRE0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rd3Q8BRE0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rd3Q8BRE0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rd3Q8BRE0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rd3Q8BRE0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms