Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nhlrc1Q8BR37 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Iqck-206ENSMUST00000208658 2891 ntBASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nhlrc1Q8BR37 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Gm10493-201ENSMUST00000097270 612 ntBASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nhlrc1Q8BR37 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhlrc1Q8BR37 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nhlrc1Q8BR37 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Smad6-203ENSMUST00000179458 273 ntBASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.34■□□□□ 0.05
Nhlrc1Q8BR37 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nhlrc1Q8BR37 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Nhlrc1Q8BR37 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nhlrc1Q8BR37 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nhlrc1Q8BR37 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nhlrc1Q8BR37 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.32■□□□□ 0.04
Nhlrc1Q8BR37 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.32■□□□□ 0.04
Nhlrc1Q8BR37 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.32■□□□□ 0.04
Nhlrc1Q8BR37 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.32■□□□□ 0.04
Nhlrc1Q8BR37 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
Nhlrc1Q8BR37 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.32■□□□□ 0.04
Nhlrc1Q8BR37 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nhlrc1Q8BR37 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms