Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 Gm45444-201ENSMUST00000211394 898 ntBASIC18.86■□□□□ 0.61
Prpf18Q8BM39 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.86■□□□□ 0.61
Prpf18Q8BM39 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf18Q8BM39 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf18Q8BM39 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf18Q8BM39 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.83■□□□□ 0.61
Prpf18Q8BM39 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Prpf18Q8BM39 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Prpf18Q8BM39 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Prpf18Q8BM39 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf18Q8BM39 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Prpf18Q8BM39 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf18Q8BM39 Gm5921-201ENSMUST00000075898 882 ntBASIC18.83■□□□□ 0.6
Prpf18Q8BM39 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf18Q8BM39 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf18Q8BM39 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Prpf18Q8BM39 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.8■□□□□ 0.6
Prpf18Q8BM39 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Prpf18Q8BM39 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.8■□□□□ 0.6
Prpf18Q8BM39 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf18Q8BM39 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf18Q8BM39 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.79■□□□□ 0.6
Prpf18Q8BM39 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf18Q8BM39 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf18Q8BM39 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf18Q8BM39 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.78■□□□□ 0.6
Prpf18Q8BM39 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Prpf18Q8BM39 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf18Q8BM39 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf18Q8BM39 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms