Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr3Q8BL00 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr3Q8BL00 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr3Q8BL00 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdhr3Q8BL00 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdhr3Q8BL00 Gm7143-201ENSMUST00000222811 859 ntBASIC17.4■□□□□ 0.38
Cdhr3Q8BL00 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr3Q8BL00 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr3Q8BL00 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr3Q8BL00 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cdhr3Q8BL00 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdhr3Q8BL00 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdhr3Q8BL00 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr3Q8BL00 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr3Q8BL00 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr3Q8BL00 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr3Q8BL00 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr3Q8BL00 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdhr3Q8BL00 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Cdhr3Q8BL00 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr3Q8BL00 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr3Q8BL00 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr3Q8BL00 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr3Q8BL00 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdhr3Q8BL00 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdhr3Q8BL00 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr3Q8BL00 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Cdhr3Q8BL00 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr3Q8BL00 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr3Q8BL00 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr3Q8BL00 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr3Q8BL00 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr3Q8BL00 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr3Q8BL00 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr3Q8BL00 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr3Q8BL00 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdhr3Q8BL00 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr3Q8BL00 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdhr3Q8BL00 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr3Q8BL00 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr3Q8BL00 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr3Q8BL00 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr3Q8BL00 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr3Q8BL00 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr3Q8BL00 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr3Q8BL00 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr3Q8BL00 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr3Q8BL00 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr3Q8BL00 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.34■□□□□ 0.37
Cdhr3Q8BL00 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdhr3Q8BL00 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr3Q8BL00 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.34■□□□□ 0.37
Cdhr3Q8BL00 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr3Q8BL00 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr3Q8BL00 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr3Q8BL00 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdhr3Q8BL00 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdhr3Q8BL00 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdhr3Q8BL00 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdhr3Q8BL00 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr3Q8BL00 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cdhr3Q8BL00 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr3Q8BL00 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr3Q8BL00 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cdhr3Q8BL00 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr3Q8BL00 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr3Q8BL00 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr3Q8BL00 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr3Q8BL00 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdhr3Q8BL00 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.32■□□□□ 0.36
Cdhr3Q8BL00 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdhr3Q8BL00 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr3Q8BL00 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cdhr3Q8BL00 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr3Q8BL00 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr3Q8BL00 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 Gm40881-201ENSMUST00000223397 166 ntBASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr3Q8BL00 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms