Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Gm13234-201ENSMUST00000120010 747 ntBASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smg1Q8BKX6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg1Q8BKX6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg1Q8BKX6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg1Q8BKX6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg1Q8BKX6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg1Q8BKX6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smg1Q8BKX6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Gm10812-201ENSMUST00000099864 546 ntBASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg1Q8BKX6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg1Q8BKX6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg1Q8BKX6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg1Q8BKX6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg1Q8BKX6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.1■□□□□ 0.33
Smg1Q8BKX6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smg1Q8BKX6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Smg1Q8BKX6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg1Q8BKX6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg1Q8BKX6 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.09■□□□□ 0.33
Smg1Q8BKX6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg1Q8BKX6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smg1Q8BKX6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.09■□□□□ 0.33
Smg1Q8BKX6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.09■□□□□ 0.33
Smg1Q8BKX6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.09■□□□□ 0.33
Smg1Q8BKX6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.09■□□□□ 0.33
Smg1Q8BKX6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg1Q8BKX6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Smg1Q8BKX6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smg1Q8BKX6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Smg1Q8BKX6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.08■□□□□ 0.33
Smg1Q8BKX6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smg1Q8BKX6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.08■□□□□ 0.32
Smg1Q8BKX6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.08■□□□□ 0.32
Smg1Q8BKX6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smg1Q8BKX6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg1Q8BKX6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg1Q8BKX6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg1Q8BKX6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg1Q8BKX6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Smg1Q8BKX6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smg1Q8BKX6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms