Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp2bQ8BJF9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Chmp2bQ8BJF9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp2bQ8BJF9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp2bQ8BJF9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp2bQ8BJF9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp2bQ8BJF9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp2bQ8BJF9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.33■□□□□ 0.85
Chmp2bQ8BJF9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.33■□□□□ 0.85
Chmp2bQ8BJF9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp2bQ8BJF9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp2bQ8BJF9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2bQ8BJF9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2bQ8BJF9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2bQ8BJF9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2bQ8BJF9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2bQ8BJF9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.31■□□□□ 0.84
Chmp2bQ8BJF9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.31■□□□□ 0.84
Chmp2bQ8BJF9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Chmp2bQ8BJF9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.31■□□□□ 0.84
Chmp2bQ8BJF9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2bQ8BJF9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.3■□□□□ 0.84
Chmp2bQ8BJF9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2bQ8BJF9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2bQ8BJF9 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.3■□□□□ 0.84
Chmp2bQ8BJF9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2bQ8BJF9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Chmp2bQ8BJF9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.3■□□□□ 0.84
Chmp2bQ8BJF9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2bQ8BJF9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2bQ8BJF9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2bQ8BJF9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2bQ8BJF9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.29■□□□□ 0.84
Chmp2bQ8BJF9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Chmp2bQ8BJF9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2bQ8BJF9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2bQ8BJF9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp2bQ8BJF9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp2bQ8BJF9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.28■□□□□ 0.84
Chmp2bQ8BJF9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chmp2bQ8BJF9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp2bQ8BJF9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp2bQ8BJF9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp2bQ8BJF9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp2bQ8BJF9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp2bQ8BJF9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp2bQ8BJF9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.25■□□□□ 0.83
Chmp2bQ8BJF9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp2bQ8BJF9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp2bQ8BJF9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp2bQ8BJF9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp2bQ8BJF9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp2bQ8BJF9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Chmp2bQ8BJF9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp2bQ8BJF9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp2bQ8BJF9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp2bQ8BJF9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp2bQ8BJF9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp2bQ8BJF9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp2bQ8BJF9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp2bQ8BJF9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp2bQ8BJF9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp2bQ8BJF9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp2bQ8BJF9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms