Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Tdp1Q8BJ37 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tdp1Q8BJ37 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tdp1Q8BJ37 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Tdp1Q8BJ37 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tdp1Q8BJ37 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tdp1Q8BJ37 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tdp1Q8BJ37 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.11■■□□□ 1.13
Tdp1Q8BJ37 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Reep4-203ENSMUST00000226563 1444 ntBASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tdp1Q8BJ37 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 Gm13234-201ENSMUST00000120010 747 ntBASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Tdp1Q8BJ37 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tdp1Q8BJ37 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Tdp1Q8BJ37 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Tdp1Q8BJ37 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tdp1Q8BJ37 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tdp1Q8BJ37 Gm27801-201ENSMUST00000184174 223 ntBASIC22.07■■□□□ 1.12
Tdp1Q8BJ37 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tdp1Q8BJ37 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tdp1Q8BJ37 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tdp1Q8BJ37 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tdp1Q8BJ37 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.06■■□□□ 1.12
Tdp1Q8BJ37 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Tdp1Q8BJ37 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Tdp1Q8BJ37 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.06■■□□□ 1.12
Tdp1Q8BJ37 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tdp1Q8BJ37 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.05■■□□□ 1.12
Tdp1Q8BJ37 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.05■■□□□ 1.12
Tdp1Q8BJ37 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Tdp1Q8BJ37 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tdp1Q8BJ37 Gm27011-201ENSMUST00000182352 972 ntBASIC22.04■■□□□ 1.12
Tdp1Q8BJ37 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tdp1Q8BJ37 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Tdp1Q8BJ37 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tdp1Q8BJ37 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tdp1Q8BJ37 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tdp1Q8BJ37 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Tdp1Q8BJ37 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tdp1Q8BJ37 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tdp1Q8BJ37 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tdp1Q8BJ37 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tdp1Q8BJ37 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tdp1Q8BJ37 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tdp1Q8BJ37 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tdp1Q8BJ37 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tdp1Q8BJ37 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tdp1Q8BJ37 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tdp1Q8BJ37 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Tdp1Q8BJ37 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms