Protein–RNA interactions for Protein: Q8BHT7

Rgp1, RAB6A-GEF complex partner protein 2, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rgp1Q8BHT7 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.65■□□□□ 0.42
Rgp1Q8BHT7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rgp1Q8BHT7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rgp1Q8BHT7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rgp1Q8BHT7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rgp1Q8BHT7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Rgp1Q8BHT7 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rgp1Q8BHT7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 Gm10399-202ENSMUST00000202768 748 ntBASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rgp1Q8BHT7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rgp1Q8BHT7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rgp1Q8BHT7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rgp1Q8BHT7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rgp1Q8BHT7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rgp1Q8BHT7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.61■□□□□ 0.41
Rgp1Q8BHT7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rgp1Q8BHT7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rgp1Q8BHT7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rgp1Q8BHT7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rgp1Q8BHT7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rgp1Q8BHT7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Rgp1Q8BHT7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.6■□□□□ 0.41
Rgp1Q8BHT7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.6■□□□□ 0.41
Rgp1Q8BHT7 Gm43566-201ENSMUST00000196851 808 ntBASIC17.6■□□□□ 0.41
Rgp1Q8BHT7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rgp1Q8BHT7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rgp1Q8BHT7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rgp1Q8BHT7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rgp1Q8BHT7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rgp1Q8BHT7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rgp1Q8BHT7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rgp1Q8BHT7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rgp1Q8BHT7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rgp1Q8BHT7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rgp1Q8BHT7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rgp1Q8BHT7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rgp1Q8BHT7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rgp1Q8BHT7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rgp1Q8BHT7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rgp1Q8BHT7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Gm7143-201ENSMUST00000222811 859 ntBASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rgp1Q8BHT7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Rgp1Q8BHT7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rgp1Q8BHT7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rgp1Q8BHT7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rgp1Q8BHT7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rgp1Q8BHT7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rgp1Q8BHT7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rgp1Q8BHT7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rgp1Q8BHT7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rgp1Q8BHT7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms