Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Gm9870-201ENSMUST00000063874 645 ntBASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1bQ8BH88 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1bQ8BH88 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1bQ8BH88 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1bQ8BH88 Gm27454-201ENSMUST00000185090 204 ntBASIC21.6■■□□□ 1.05
Depdc1bQ8BH88 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1bQ8BH88 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1bQ8BH88 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1bQ8BH88 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1bQ8BH88 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1bQ8BH88 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.59■■□□□ 1.05
Depdc1bQ8BH88 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1bQ8BH88 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.59■■□□□ 1.05
Depdc1bQ8BH88 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1bQ8BH88 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1bQ8BH88 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1bQ8BH88 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1bQ8BH88 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1bQ8BH88 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Depdc1bQ8BH88 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1bQ8BH88 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1bQ8BH88 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Depdc1bQ8BH88 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Depdc1bQ8BH88 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Depdc1bQ8BH88 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Depdc1bQ8BH88 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Depdc1bQ8BH88 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1bQ8BH88 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.56■■□□□ 1.04
Depdc1bQ8BH88 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.56■■□□□ 1.04
Depdc1bQ8BH88 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1bQ8BH88 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1bQ8BH88 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1bQ8BH88 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1bQ8BH88 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.55■■□□□ 1.04
Depdc1bQ8BH88 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1bQ8BH88 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1bQ8BH88 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1bQ8BH88 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1bQ8BH88 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1bQ8BH88 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1bQ8BH88 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 Gm45417-201ENSMUST00000209533 758 ntBASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1bQ8BH88 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1bQ8BH88 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1bQ8BH88 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1bQ8BH88 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1bQ8BH88 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.52■■□□□ 1.04
Depdc1bQ8BH88 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Depdc1bQ8BH88 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Depdc1bQ8BH88 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Depdc1bQ8BH88 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1bQ8BH88 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1bQ8BH88 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1bQ8BH88 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Depdc1bQ8BH88 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1bQ8BH88 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1bQ8BH88 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1bQ8BH88 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc1bQ8BH88 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms