Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Samm50Q8BGH2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.31■■□□□ 1.32
Samm50Q8BGH2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.31■■□□□ 1.32
Samm50Q8BGH2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Samm50Q8BGH2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Samm50Q8BGH2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.31■■□□□ 1.32
Samm50Q8BGH2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Samm50Q8BGH2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Samm50Q8BGH2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.3■■□□□ 1.32
Samm50Q8BGH2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Samm50Q8BGH2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Samm50Q8BGH2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Samm50Q8BGH2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Gm9847-201ENSMUST00000052528 599 ntBASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Samm50Q8BGH2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Samm50Q8BGH2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Samm50Q8BGH2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
Samm50Q8BGH2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Samm50Q8BGH2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Samm50Q8BGH2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Samm50Q8BGH2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Samm50Q8BGH2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.26■■□□□ 1.31
Samm50Q8BGH2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.26■■□□□ 1.31
Samm50Q8BGH2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Samm50Q8BGH2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.25■■□□□ 1.31
Samm50Q8BGH2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.25■■□□□ 1.31
Samm50Q8BGH2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Samm50Q8BGH2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Samm50Q8BGH2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.25■■□□□ 1.31
Samm50Q8BGH2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Samm50Q8BGH2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Samm50Q8BGH2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Samm50Q8BGH2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Samm50Q8BGH2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.24■■□□□ 1.31
Samm50Q8BGH2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.24■■□□□ 1.31
Samm50Q8BGH2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Samm50Q8BGH2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Samm50Q8BGH2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Samm50Q8BGH2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Samm50Q8BGH2 Gm13241-201ENSMUST00000094493 780 ntBASIC23.23■■□□□ 1.31
Samm50Q8BGH2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Samm50Q8BGH2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Samm50Q8BGH2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Samm50Q8BGH2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Samm50Q8BGH2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Samm50Q8BGH2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Samm50Q8BGH2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.22■■□□□ 1.31
Samm50Q8BGH2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Samm50Q8BGH2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Samm50Q8BGH2 Gm12922-201ENSMUST00000120626 809 ntBASIC23.22■■□□□ 1.31
Samm50Q8BGH2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.22■■□□□ 1.31
Samm50Q8BGH2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
Samm50Q8BGH2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Samm50Q8BGH2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Samm50Q8BGH2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.21■■□□□ 1.31
Samm50Q8BGH2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Samm50Q8BGH2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Samm50Q8BGH2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Samm50Q8BGH2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Samm50Q8BGH2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.21■■□□□ 1.31
Samm50Q8BGH2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.2■■□□□ 1.3
Samm50Q8BGH2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Samm50Q8BGH2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Samm50Q8BGH2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.2■■□□□ 1.3
Samm50Q8BGH2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Samm50Q8BGH2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Samm50Q8BGH2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Samm50Q8BGH2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Samm50Q8BGH2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Samm50Q8BGH2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Samm50Q8BGH2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms