Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim50Q810I2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim50Q810I2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim50Q810I2 Gm9847-201ENSMUST00000052528 599 ntBASIC19.39■□□□□ 0.69
Trim50Q810I2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim50Q810I2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim50Q810I2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim50Q810I2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim50Q810I2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Trim50Q810I2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim50Q810I2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim50Q810I2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim50Q810I2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim50Q810I2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Trim50Q810I2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim50Q810I2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim50Q810I2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Trim50Q810I2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim50Q810I2 Mir6236-201ENSMUST00000184437 123 ntBASIC19.37■□□□□ 0.69
Trim50Q810I2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim50Q810I2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim50Q810I2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim50Q810I2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim50Q810I2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim50Q810I2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim50Q810I2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim50Q810I2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim50Q810I2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim50Q810I2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim50Q810I2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim50Q810I2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim50Q810I2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim50Q810I2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim50Q810I2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim50Q810I2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim50Q810I2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim50Q810I2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim50Q810I2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim50Q810I2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim50Q810I2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim50Q810I2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim50Q810I2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim50Q810I2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim50Q810I2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim50Q810I2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim50Q810I2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim50Q810I2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim50Q810I2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim50Q810I2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim50Q810I2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim50Q810I2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim50Q810I2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim50Q810I2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim50Q810I2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim50Q810I2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim50Q810I2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim50Q810I2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim50Q810I2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.34■□□□□ 0.69
Trim50Q810I2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim50Q810I2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim50Q810I2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim50Q810I2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim50Q810I2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim50Q810I2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim50Q810I2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim50Q810I2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim50Q810I2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim50Q810I2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim50Q810I2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Trim50Q810I2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim50Q810I2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim50Q810I2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim50Q810I2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.32■□□□□ 0.68
Trim50Q810I2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.32■□□□□ 0.68
Trim50Q810I2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.32■□□□□ 0.68
Trim50Q810I2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
Trim50Q810I2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim50Q810I2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim50Q810I2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim50Q810I2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim50Q810I2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim50Q810I2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim50Q810I2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.31■□□□□ 0.68
Trim50Q810I2 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.31■□□□□ 0.68
Trim50Q810I2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim50Q810I2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim50Q810I2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim50Q810I2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim50Q810I2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms