Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vrk1Q80X41 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Vrk1Q80X41 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Vrk1Q80X41 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.03■□□□□ 0.64
Vrk1Q80X41 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vrk1Q80X41 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vrk1Q80X41 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vrk1Q80X41 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Vrk1Q80X41 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vrk1Q80X41 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Vrk1Q80X41 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vrk1Q80X41 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vrk1Q80X41 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vrk1Q80X41 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vrk1Q80X41 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vrk1Q80X41 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vrk1Q80X41 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vrk1Q80X41 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Vrk1Q80X41 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vrk1Q80X41 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vrk1Q80X41 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vrk1Q80X41 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vrk1Q80X41 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.01■□□□□ 0.63
Vrk1Q80X41 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vrk1Q80X41 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vrk1Q80X41 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Vrk1Q80X41 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vrk1Q80X41 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vrk1Q80X41 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Vrk1Q80X41 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vrk1Q80X41 Gm11421-201ENSMUST00000122124 294 ntBASIC19■□□□□ 0.63
Vrk1Q80X41 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Vrk1Q80X41 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vrk1Q80X41 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Vrk1Q80X41 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19■□□□□ 0.63
Vrk1Q80X41 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vrk1Q80X41 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vrk1Q80X41 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Vrk1Q80X41 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vrk1Q80X41 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vrk1Q80X41 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vrk1Q80X41 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vrk1Q80X41 Gm18671-201ENSMUST00000214826 683 ntBASIC18.99■□□□□ 0.63
Vrk1Q80X41 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vrk1Q80X41 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vrk1Q80X41 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vrk1Q80X41 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vrk1Q80X41 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vrk1Q80X41 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vrk1Q80X41 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vrk1Q80X41 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vrk1Q80X41 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vrk1Q80X41 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.98■□□□□ 0.63
Vrk1Q80X41 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vrk1Q80X41 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vrk1Q80X41 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.97■□□□□ 0.63
Vrk1Q80X41 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.97■□□□□ 0.63
Vrk1Q80X41 Mir6236-201ENSMUST00000184437 123 ntBASIC18.97■□□□□ 0.63
Vrk1Q80X41 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vrk1Q80X41 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vrk1Q80X41 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vrk1Q80X41 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vrk1Q80X41 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vrk1Q80X41 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Gm37179-201ENSMUST00000194862 823 ntBASIC18.95■□□□□ 0.62
Vrk1Q80X41 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vrk1Q80X41 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Gm10033-202ENSMUST00000211874 928 ntBASIC18.94■□□□□ 0.62
Vrk1Q80X41 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.94■□□□□ 0.62
Vrk1Q80X41 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms