Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Trim62Q80V85 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim62Q80V85 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim62Q80V85 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim62Q80V85 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim62Q80V85 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim62Q80V85 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Trim62Q80V85 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim62Q80V85 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.64■□□□□ 0.89
Trim62Q80V85 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim62Q80V85 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim62Q80V85 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Trim62Q80V85 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim62Q80V85 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
Trim62Q80V85 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim62Q80V85 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim62Q80V85 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.63■□□□□ 0.89
Trim62Q80V85 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim62Q80V85 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim62Q80V85 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
Trim62Q80V85 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim62Q80V85 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim62Q80V85 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim62Q80V85 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim62Q80V85 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim62Q80V85 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim62Q80V85 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim62Q80V85 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim62Q80V85 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim62Q80V85 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim62Q80V85 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim62Q80V85 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim62Q80V85 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim62Q80V85 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.62■□□□□ 0.89
Trim62Q80V85 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim62Q80V85 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim62Q80V85 Gm8493-201ENSMUST00000196881 489 ntBASIC20.61■□□□□ 0.89
Trim62Q80V85 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim62Q80V85 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim62Q80V85 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim62Q80V85 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim62Q80V85 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim62Q80V85 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Trim62Q80V85 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.6■□□□□ 0.89
Trim62Q80V85 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim62Q80V85 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Trim62Q80V85 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim62Q80V85 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim62Q80V85 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim62Q80V85 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.59■□□□□ 0.89
Trim62Q80V85 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim62Q80V85 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Trim62Q80V85 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim62Q80V85 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.59■□□□□ 0.89
Trim62Q80V85 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim62Q80V85 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim62Q80V85 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.59■□□□□ 0.89
Trim62Q80V85 Gm6139-201ENSMUST00000079261 882 ntBASIC20.59■□□□□ 0.89
Trim62Q80V85 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim62Q80V85 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim62Q80V85 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trim62Q80V85 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim62Q80V85 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim62Q80V85 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim62Q80V85 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim62Q80V85 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Trim62Q80V85 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim62Q80V85 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.58■□□□□ 0.88
Trim62Q80V85 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim62Q80V85 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.58■□□□□ 0.88
Trim62Q80V85 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim62Q80V85 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim62Q80V85 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim62Q80V85 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim62Q80V85 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim62Q80V85 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim62Q80V85 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.57■□□□□ 0.88
Trim62Q80V85 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim62Q80V85 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim62Q80V85 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.57■□□□□ 0.88
Trim62Q80V85 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim62Q80V85 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim62Q80V85 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim62Q80V85 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim62Q80V85 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim62Q80V85 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim62Q80V85 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim62Q80V85 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.56■□□□□ 0.88
Trim62Q80V85 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim62Q80V85 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim62Q80V85 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms