Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp8Q80U87 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp8Q80U87 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Usp8Q80U87 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Usp8Q80U87 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp8Q80U87 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.86■□□□□ 0.77
Usp8Q80U87 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp8Q80U87 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp8Q80U87 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp8Q80U87 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp8Q80U87 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp8Q80U87 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp8Q80U87 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp8Q80U87 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Usp8Q80U87 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.84■□□□□ 0.77
Usp8Q80U87 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp8Q80U87 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp8Q80U87 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp8Q80U87 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp8Q80U87 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp8Q80U87 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp8Q80U87 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp8Q80U87 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp8Q80U87 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp8Q80U87 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Usp8Q80U87 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp8Q80U87 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp8Q80U87 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp8Q80U87 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp8Q80U87 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Usp8Q80U87 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp8Q80U87 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp8Q80U87 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.82■□□□□ 0.76
Usp8Q80U87 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp8Q80U87 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Usp8Q80U87 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp8Q80U87 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp8Q80U87 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.82■□□□□ 0.76
Usp8Q80U87 Gm7143-201ENSMUST00000222811 859 ntBASIC19.82■□□□□ 0.76
Usp8Q80U87 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp8Q80U87 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp8Q80U87 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.82■□□□□ 0.76
Usp8Q80U87 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp8Q80U87 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp8Q80U87 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.82■□□□□ 0.76
Usp8Q80U87 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp8Q80U87 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp8Q80U87 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp8Q80U87 Gm15546-201ENSMUST00000122095 826 ntBASIC19.81■□□□□ 0.76
Usp8Q80U87 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp8Q80U87 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp8Q80U87 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Usp8Q80U87 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Usp8Q80U87 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp8Q80U87 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp8Q80U87 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.8■□□□□ 0.76
Usp8Q80U87 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp8Q80U87 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Usp8Q80U87 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp8Q80U87 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp8Q80U87 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp8Q80U87 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp8Q80U87 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.79■□□□□ 0.76
Usp8Q80U87 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.79■□□□□ 0.76
Usp8Q80U87 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp8Q80U87 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp8Q80U87 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp8Q80U87 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp8Q80U87 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
Usp8Q80U87 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp8Q80U87 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp8Q80U87 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp8Q80U87 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp8Q80U87 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp8Q80U87 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp8Q80U87 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp8Q80U87 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp8Q80U87 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Usp8Q80U87 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp8Q80U87 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp8Q80U87 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp8Q80U87 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms