Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh19Q80TF3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh19Q80TF3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh19Q80TF3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh19Q80TF3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh19Q80TF3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh19Q80TF3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh19Q80TF3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh19Q80TF3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh19Q80TF3 Gm18284-201ENSMUST00000172604 624 ntBASIC19.56■□□□□ 0.72
Pcdh19Q80TF3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh19Q80TF3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh19Q80TF3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh19Q80TF3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh19Q80TF3 Gm8495-201ENSMUST00000188740 694 ntBASIC19.54■□□□□ 0.72
Pcdh19Q80TF3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdh19Q80TF3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh19Q80TF3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh19Q80TF3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Smad6-203ENSMUST00000179458 273 ntBASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdh19Q80TF3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh19Q80TF3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pcdh19Q80TF3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh19Q80TF3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh19Q80TF3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh19Q80TF3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.52■□□□□ 0.72
Pcdh19Q80TF3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh19Q80TF3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh19Q80TF3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Pcdh19Q80TF3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdh19Q80TF3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Pcdh19Q80TF3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdh19Q80TF3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh19Q80TF3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh19Q80TF3 Gm40848-201ENSMUST00000221998 324 ntBASIC19.51■□□□□ 0.71
Pcdh19Q80TF3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdh19Q80TF3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh19Q80TF3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdh19Q80TF3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdh19Q80TF3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh19Q80TF3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh19Q80TF3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh19Q80TF3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdh19Q80TF3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh19Q80TF3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh19Q80TF3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh19Q80TF3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh19Q80TF3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Pcdh19Q80TF3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdh19Q80TF3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh19Q80TF3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh19Q80TF3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh19Q80TF3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh19Q80TF3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh19Q80TF3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.48■□□□□ 0.71
Pcdh19Q80TF3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh19Q80TF3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms