Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf38bQ80SY5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf38bQ80SY5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38bQ80SY5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38bQ80SY5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.73■□□□□ 0.91
Prpf38bQ80SY5 Gm10033-202ENSMUST00000211874 928 ntBASIC20.73■□□□□ 0.91
Prpf38bQ80SY5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38bQ80SY5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38bQ80SY5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38bQ80SY5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
Prpf38bQ80SY5 Nespas-201ENSMUST00000143738 1083 ntBASIC20.72■□□□□ 0.91
Prpf38bQ80SY5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38bQ80SY5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.72■□□□□ 0.91
Prpf38bQ80SY5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38bQ80SY5 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.72■□□□□ 0.91
Prpf38bQ80SY5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38bQ80SY5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38bQ80SY5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Prpf38bQ80SY5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Prpf38bQ80SY5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.71■□□□□ 0.91
Prpf38bQ80SY5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.71■□□□□ 0.91
Prpf38bQ80SY5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Prpf38bQ80SY5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38bQ80SY5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38bQ80SY5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38bQ80SY5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38bQ80SY5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38bQ80SY5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38bQ80SY5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38bQ80SY5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Prpf38bQ80SY5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38bQ80SY5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38bQ80SY5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38bQ80SY5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38bQ80SY5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38bQ80SY5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38bQ80SY5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38bQ80SY5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 Golph3-202ENSMUST00000226517 2359 ntBASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38bQ80SY5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms