Protein–RNA interactions for Protein: Q6W8Q3

Pcp4l1, Purkinje cell protein 4-like protein 1, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4l1Q6W8Q3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcp4l1Q6W8Q3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Pcp4l1Q6W8Q3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcp4l1Q6W8Q3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Pcp4l1Q6W8Q3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pcp4l1Q6W8Q3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcp4l1Q6W8Q3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcp4l1Q6W8Q3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4l1Q6W8Q3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4l1Q6W8Q3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4l1Q6W8Q3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4l1Q6W8Q3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4l1Q6W8Q3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4l1Q6W8Q3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4l1Q6W8Q3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4l1Q6W8Q3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4l1Q6W8Q3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4l1Q6W8Q3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4l1Q6W8Q3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4l1Q6W8Q3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4l1Q6W8Q3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4l1Q6W8Q3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4l1Q6W8Q3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcp4l1Q6W8Q3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcp4l1Q6W8Q3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4l1Q6W8Q3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcp4l1Q6W8Q3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcp4l1Q6W8Q3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcp4l1Q6W8Q3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcp4l1Q6W8Q3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcp4l1Q6W8Q3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcp4l1Q6W8Q3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcp4l1Q6W8Q3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcp4l1Q6W8Q3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Pcp4l1Q6W8Q3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcp4l1Q6W8Q3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcp4l1Q6W8Q3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms