Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 Gm12527-201ENSMUST00000117967 564 ntBASIC23.1■■□□□ 1.29
Scn10aQ6QIY3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.1■■□□□ 1.29
Scn10aQ6QIY3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scn10aQ6QIY3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scn10aQ6QIY3 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.1■■□□□ 1.29
Scn10aQ6QIY3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.1■■□□□ 1.29
Scn10aQ6QIY3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scn10aQ6QIY3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Scn10aQ6QIY3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn10aQ6QIY3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn10aQ6QIY3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn10aQ6QIY3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scn10aQ6QIY3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.08■■□□□ 1.29
Scn10aQ6QIY3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Scn10aQ6QIY3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.28
Scn10aQ6QIY3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Scn10aQ6QIY3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Scn10aQ6QIY3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn10aQ6QIY3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn10aQ6QIY3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Scn10aQ6QIY3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
Scn10aQ6QIY3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn10aQ6QIY3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Scn10aQ6QIY3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.06■■□□□ 1.28
Scn10aQ6QIY3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn10aQ6QIY3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.06■■□□□ 1.28
Scn10aQ6QIY3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn10aQ6QIY3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn10aQ6QIY3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn10aQ6QIY3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.05■■□□□ 1.28
Scn10aQ6QIY3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Scn10aQ6QIY3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn10aQ6QIY3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn10aQ6QIY3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Scn10aQ6QIY3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Scn10aQ6QIY3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn10aQ6QIY3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Scn10aQ6QIY3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scn10aQ6QIY3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Scn10aQ6QIY3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scn10aQ6QIY3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.03■■□□□ 1.28
Scn10aQ6QIY3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn10aQ6QIY3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Scn10aQ6QIY3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn10aQ6QIY3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn10aQ6QIY3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Scn10aQ6QIY3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn10aQ6QIY3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn10aQ6QIY3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Scn10aQ6QIY3 Gm20760-201ENSMUST00000179197 648 ntBASIC23.01■■□□□ 1.27
Scn10aQ6QIY3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scn10aQ6QIY3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Scn10aQ6QIY3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Scn10aQ6QIY3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.01■■□□□ 1.27
Scn10aQ6QIY3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scn10aQ6QIY3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scn10aQ6QIY3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Scn10aQ6QIY3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Scn10aQ6QIY3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Scn10aQ6QIY3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Scn10aQ6QIY3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Scn10aQ6QIY3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Scn10aQ6QIY3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.99■■□□□ 1.27
Scn10aQ6QIY3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Scn10aQ6QIY3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.99■■□□□ 1.27
Scn10aQ6QIY3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Scn10aQ6QIY3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Scn10aQ6QIY3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scn10aQ6QIY3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Scn10aQ6QIY3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scn10aQ6QIY3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.98■■□□□ 1.27
Scn10aQ6QIY3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scn10aQ6QIY3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Scn10aQ6QIY3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.97■■□□□ 1.27
Scn10aQ6QIY3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Scn10aQ6QIY3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Scn10aQ6QIY3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Scn10aQ6QIY3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Scn10aQ6QIY3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms