Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
Ddx58Q6Q899 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.79■■□□□ 1.56
Ddx58Q6Q899 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx58Q6Q899 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx58Q6Q899 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx58Q6Q899 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Ddx58Q6Q899 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx58Q6Q899 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx58Q6Q899 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx58Q6Q899 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.77■■□□□ 1.56
Ddx58Q6Q899 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.76■■□□□ 1.55
Ddx58Q6Q899 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Ddx58Q6Q899 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
Ddx58Q6Q899 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx58Q6Q899 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx58Q6Q899 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
Ddx58Q6Q899 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx58Q6Q899 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.75■■□□□ 1.55
Ddx58Q6Q899 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.75■■□□□ 1.55
Ddx58Q6Q899 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx58Q6Q899 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx58Q6Q899 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx58Q6Q899 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx58Q6Q899 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Ddx58Q6Q899 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Ddx58Q6Q899 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx58Q6Q899 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx58Q6Q899 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Ddx58Q6Q899 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx58Q6Q899 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Ddx58Q6Q899 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.73■■□□□ 1.55
Ddx58Q6Q899 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx58Q6Q899 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Ddx58Q6Q899 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx58Q6Q899 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx58Q6Q899 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx58Q6Q899 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.71■■□□□ 1.55
Ddx58Q6Q899 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.71■■□□□ 1.55
Ddx58Q6Q899 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx58Q6Q899 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.7■■□□□ 1.55
Ddx58Q6Q899 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Ddx58Q6Q899 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Ddx58Q6Q899 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
Ddx58Q6Q899 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Ddx58Q6Q899 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC24.7■■□□□ 1.54
Ddx58Q6Q899 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx58Q6Q899 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx58Q6Q899 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx58Q6Q899 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx58Q6Q899 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx58Q6Q899 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx58Q6Q899 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx58Q6Q899 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx58Q6Q899 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx58Q6Q899 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.69■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms