Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.66■□□□□ 0.42
Snrnp40Q6PE01 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.66■□□□□ 0.42
Snrnp40Q6PE01 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.66■□□□□ 0.42
Snrnp40Q6PE01 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp40Q6PE01 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.66■□□□□ 0.42
Snrnp40Q6PE01 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Snrnp40Q6PE01 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp40Q6PE01 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp40Q6PE01 Gm12441-201ENSMUST00000121806 588 ntBASIC17.64■□□□□ 0.41
Snrnp40Q6PE01 Nespas-201ENSMUST00000143738 1083 ntBASIC17.64■□□□□ 0.41
Snrnp40Q6PE01 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp40Q6PE01 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp40Q6PE01 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp40Q6PE01 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp40Q6PE01 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp40Q6PE01 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp40Q6PE01 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp40Q6PE01 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp40Q6PE01 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp40Q6PE01 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Mir5133-201ENSMUST00000174955 77 ntBASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.61■□□□□ 0.41
Snrnp40Q6PE01 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.6■□□□□ 0.41
Snrnp40Q6PE01 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Snrnp40Q6PE01 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snrnp40Q6PE01 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snrnp40Q6PE01 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snrnp40Q6PE01 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snrnp40Q6PE01 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snrnp40Q6PE01 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snrnp40Q6PE01 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snrnp40Q6PE01 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Gm10653-202ENSMUST00000139570 835 ntBASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Snrnp40Q6PE01 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Snrnp40Q6PE01 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snrnp40Q6PE01 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snrnp40Q6PE01 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snrnp40Q6PE01 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Snrnp40Q6PE01 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms