Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm27011-201ENSMUST00000182352 972 ntBASIC26.53■■□□□ 1.84
Chd4Q6PDQ2 Gm9988-201ENSMUST00000069786 435 ntBASIC26.53■■□□□ 1.84
Chd4Q6PDQ2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Chd4Q6PDQ2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Chd4Q6PDQ2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC26.52■■□□□ 1.84
Chd4Q6PDQ2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Chd4Q6PDQ2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Chd4Q6PDQ2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC26.51■■□□□ 1.83
Chd4Q6PDQ2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Chd4Q6PDQ2 Gm42778-201ENSMUST00000199644 553 ntBASIC26.51■■□□□ 1.83
Chd4Q6PDQ2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Chd4Q6PDQ2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Chd4Q6PDQ2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Chd4Q6PDQ2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC26.51■■□□□ 1.83
Chd4Q6PDQ2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Chd4Q6PDQ2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC26.51■■□□□ 1.83
Chd4Q6PDQ2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Chd4Q6PDQ2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Chd4Q6PDQ2 Dmtn-209ENSMUST00000228295 2572 ntBASIC26.5■■□□□ 1.83
Chd4Q6PDQ2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC26.5■■□□□ 1.83
Chd4Q6PDQ2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Chd4Q6PDQ2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Chd4Q6PDQ2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Chd4Q6PDQ2 Gm10571-201ENSMUST00000097869 1638 ntBASIC26.5■■□□□ 1.83
Chd4Q6PDQ2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Chd4Q6PDQ2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Chd4Q6PDQ2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC26.48■■□□□ 1.83
Chd4Q6PDQ2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Chd4Q6PDQ2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Chd4Q6PDQ2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Chd4Q6PDQ2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC26.48■■□□□ 1.83
Chd4Q6PDQ2 CT030146.1-201ENSMUST00000220919 217 ntBASIC26.48■■□□□ 1.83
Chd4Q6PDQ2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC26.48■■□□□ 1.83
Chd4Q6PDQ2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC26.47■■□□□ 1.83
Chd4Q6PDQ2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Chd4Q6PDQ2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
Chd4Q6PDQ2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Chd4Q6PDQ2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Chd4Q6PDQ2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Chd4Q6PDQ2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Chd4Q6PDQ2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
Chd4Q6PDQ2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Chd4Q6PDQ2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Chd4Q6PDQ2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Chd4Q6PDQ2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Chd4Q6PDQ2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Chd4Q6PDQ2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Chd4Q6PDQ2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Chd4Q6PDQ2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
Chd4Q6PDQ2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC26.45■■□□□ 1.83
Chd4Q6PDQ2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC26.45■■□□□ 1.83
Chd4Q6PDQ2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC26.45■■□□□ 1.83
Chd4Q6PDQ2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Chd4Q6PDQ2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Chd4Q6PDQ2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Chd4Q6PDQ2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chd4Q6PDQ2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chd4Q6PDQ2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC26.44■■□□□ 1.82
Chd4Q6PDQ2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Chd4Q6PDQ2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chd4Q6PDQ2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chd4Q6PDQ2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Chd4Q6PDQ2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC26.43■■□□□ 1.82
Chd4Q6PDQ2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Chd4Q6PDQ2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Chd4Q6PDQ2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Chd4Q6PDQ2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Chd4Q6PDQ2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Chd4Q6PDQ2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Chd4Q6PDQ2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Chd4Q6PDQ2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Chd4Q6PDQ2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC26.42■■□□□ 1.82
Chd4Q6PDQ2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Chd4Q6PDQ2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Chd4Q6PDQ2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC26.42■■□□□ 1.82
Chd4Q6PDQ2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Chd4Q6PDQ2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Chd4Q6PDQ2 Spcs1-207ENSMUST00000228767 1008 ntBASIC26.41■■□□□ 1.82
Chd4Q6PDQ2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chd4Q6PDQ2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Chd4Q6PDQ2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chd4Q6PDQ2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chd4Q6PDQ2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Chd4Q6PDQ2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chd4Q6PDQ2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Chd4Q6PDQ2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Chd4Q6PDQ2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Chd4Q6PDQ2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Chd4Q6PDQ2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
Chd4Q6PDQ2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Chd4Q6PDQ2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms