Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rundc3bQ6PDC0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rundc3bQ6PDC0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rundc3bQ6PDC0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Rundc3bQ6PDC0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3bQ6PDC0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3bQ6PDC0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3bQ6PDC0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3bQ6PDC0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Rundc3bQ6PDC0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3bQ6PDC0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Rundc3bQ6PDC0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rundc3bQ6PDC0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rundc3bQ6PDC0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.71■□□□□ 0.59
Rundc3bQ6PDC0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rundc3bQ6PDC0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rundc3bQ6PDC0 Gm6311-201ENSMUST00000073790 878 ntBASIC18.71■□□□□ 0.59
Rundc3bQ6PDC0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rundc3bQ6PDC0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rundc3bQ6PDC0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Rundc3bQ6PDC0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3bQ6PDC0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3bQ6PDC0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3bQ6PDC0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rundc3bQ6PDC0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3bQ6PDC0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3bQ6PDC0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3bQ6PDC0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3bQ6PDC0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Rundc3bQ6PDC0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3bQ6PDC0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3bQ6PDC0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rundc3bQ6PDC0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rundc3bQ6PDC0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rundc3bQ6PDC0 Golph3-205ENSMUST00000228671 2842 ntBASIC18.64■□□□□ 0.58
Rundc3bQ6PDC0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Rundc3bQ6PDC0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rundc3bQ6PDC0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rundc3bQ6PDC0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms