Protein–RNA interactions for Protein: Q6NZF1

Zc3h11a, Zinc finger CCCH domain-containing protein 11A, mousemouse

Known RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h11aQ6NZF1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Gm21956-201ENSMUST00000179946 522 ntBASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h11aQ6NZF1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h11aQ6NZF1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Zc3h11aQ6NZF1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3h11aQ6NZF1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Zc3h11aQ6NZF1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3h11aQ6NZF1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Zc3h11aQ6NZF1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3h11aQ6NZF1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.39■□□□□ 0.69
Zc3h11aQ6NZF1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Zc3h11aQ6NZF1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Zc3h11aQ6NZF1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Zc3h11aQ6NZF1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.38■□□□□ 0.69
Zc3h11aQ6NZF1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.38■□□□□ 0.69
Zc3h11aQ6NZF1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Zc3h11aQ6NZF1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h11aQ6NZF1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.37■□□□□ 0.69
Zc3h11aQ6NZF1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h11aQ6NZF1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h11aQ6NZF1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h11aQ6NZF1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.37■□□□□ 0.69
Zc3h11aQ6NZF1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h11aQ6NZF1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Zc3h11aQ6NZF1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h11aQ6NZF1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h11aQ6NZF1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h11aQ6NZF1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h11aQ6NZF1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h11aQ6NZF1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h11aQ6NZF1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h11aQ6NZF1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h11aQ6NZF1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h11aQ6NZF1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Zc3h11aQ6NZF1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h11aQ6NZF1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.34■□□□□ 0.69
Zc3h11aQ6NZF1 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.34■□□□□ 0.69
Zc3h11aQ6NZF1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h11aQ6NZF1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.34■□□□□ 0.69
Zc3h11aQ6NZF1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3h11aQ6NZF1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3h11aQ6NZF1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3h11aQ6NZF1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3h11aQ6NZF1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3h11aQ6NZF1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3h11aQ6NZF1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h11aQ6NZF1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h11aQ6NZF1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h11aQ6NZF1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h11aQ6NZF1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h11aQ6NZF1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h11aQ6NZF1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h11aQ6NZF1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h11aQ6NZF1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.32■□□□□ 0.68
Zc3h11aQ6NZF1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h11aQ6NZF1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h11aQ6NZF1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h11aQ6NZF1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h11aQ6NZF1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h11aQ6NZF1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h11aQ6NZF1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h11aQ6NZF1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h11aQ6NZF1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Zc3h11aQ6NZF1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h11aQ6NZF1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Zc3h11aQ6NZF1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h11aQ6NZF1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms