Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdhga7Q6DD96 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga7Q6DD96 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga7Q6DD96 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga7Q6DD96 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga7Q6DD96 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga7Q6DD96 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga7Q6DD96 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhga7Q6DD96 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdhga7Q6DD96 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga7Q6DD96 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhga7Q6DD96 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga7Q6DD96 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga7Q6DD96 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga7Q6DD96 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhga7Q6DD96 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga7Q6DD96 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga7Q6DD96 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhga7Q6DD96 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhga7Q6DD96 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Pcdhga7Q6DD96 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Gm15820-201ENSMUST00000201566 728 ntBASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga7Q6DD96 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga7Q6DD96 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga7Q6DD96 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga7Q6DD96 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga7Q6DD96 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.25■□□□□ 0.67
Pcdhga7Q6DD96 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga7Q6DD96 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga7Q6DD96 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga7Q6DD96 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhga7Q6DD96 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga7Q6DD96 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga7Q6DD96 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga7Q6DD96 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.23■□□□□ 0.67
Pcdhga7Q6DD96 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga7Q6DD96 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhga7Q6DD96 Gm5812-201ENSMUST00000061073 957 ntBASIC19.23■□□□□ 0.67
Pcdhga7Q6DD96 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga7Q6DD96 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga7Q6DD96 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga7Q6DD96 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms