Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.18■□□□□ 0.66
AtmQ62388 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.18■□□□□ 0.66
AtmQ62388 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AtmQ62388 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.18■□□□□ 0.66
AtmQ62388 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
AtmQ62388 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.18■□□□□ 0.66
AtmQ62388 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AtmQ62388 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AtmQ62388 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AtmQ62388 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AtmQ62388 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AtmQ62388 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AtmQ62388 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AtmQ62388 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AtmQ62388 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
AtmQ62388 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.17■□□□□ 0.66
AtmQ62388 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AtmQ62388 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
AtmQ62388 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.16■□□□□ 0.66
AtmQ62388 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AtmQ62388 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AtmQ62388 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.16■□□□□ 0.66
AtmQ62388 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AtmQ62388 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AtmQ62388 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AtmQ62388 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AtmQ62388 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AtmQ62388 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AtmQ62388 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AtmQ62388 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AtmQ62388 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
AtmQ62388 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
AtmQ62388 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.15■□□□□ 0.66
AtmQ62388 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AtmQ62388 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AtmQ62388 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AtmQ62388 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
AtmQ62388 Gm7514-201ENSMUST00000209475 934 ntBASIC19.15■□□□□ 0.66
AtmQ62388 Gm9988-201ENSMUST00000069786 435 ntBASIC19.15■□□□□ 0.66
AtmQ62388 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.15■□□□□ 0.66
AtmQ62388 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
AtmQ62388 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.14■□□□□ 0.66
AtmQ62388 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
AtmQ62388 Gm10812-201ENSMUST00000099864 546 ntBASIC19.14■□□□□ 0.66
AtmQ62388 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.14■□□□□ 0.66
AtmQ62388 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
AtmQ62388 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.14■□□□□ 0.65
AtmQ62388 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AtmQ62388 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
AtmQ62388 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
AtmQ62388 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AtmQ62388 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AtmQ62388 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.14■□□□□ 0.65
AtmQ62388 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
AtmQ62388 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AtmQ62388 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
AtmQ62388 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AtmQ62388 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AtmQ62388 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AtmQ62388 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.13■□□□□ 0.65
AtmQ62388 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.13■□□□□ 0.65
AtmQ62388 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
AtmQ62388 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AtmQ62388 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.13■□□□□ 0.65
AtmQ62388 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.13■□□□□ 0.65
AtmQ62388 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
AtmQ62388 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AtmQ62388 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AtmQ62388 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AtmQ62388 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AtmQ62388 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AtmQ62388 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AtmQ62388 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AtmQ62388 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.12■□□□□ 0.65
AtmQ62388 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AtmQ62388 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.12■□□□□ 0.65
AtmQ62388 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
AtmQ62388 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.12■□□□□ 0.65
AtmQ62388 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
AtmQ62388 Gm13836-201ENSMUST00000121159 501 ntBASIC19.11■□□□□ 0.65
AtmQ62388 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
AtmQ62388 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AtmQ62388 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AtmQ62388 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AtmQ62388 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
AtmQ62388 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
AtmQ62388 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
AtmQ62388 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AtmQ62388 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AtmQ62388 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AtmQ62388 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.1■□□□□ 0.65
AtmQ62388 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
AtmQ62388 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.1■□□□□ 0.65
AtmQ62388 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AtmQ62388 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AtmQ62388 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AtmQ62388 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AtmQ62388 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AtmQ62388 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AtmQ62388 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms