Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six3Q62233 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Six3Q62233 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six3Q62233 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six3Q62233 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six3Q62233 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six3Q62233 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Six3Q62233 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six3Q62233 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six3Q62233 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six3Q62233 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six3Q62233 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.48■□□□□ 0.71
Six3Q62233 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six3Q62233 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six3Q62233 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six3Q62233 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six3Q62233 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six3Q62233 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six3Q62233 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Six3Q62233 Gm7417-201ENSMUST00000192950 473 ntBASIC19.47■□□□□ 0.71
Six3Q62233 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six3Q62233 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Six3Q62233 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six3Q62233 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six3Q62233 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Six3Q62233 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six3Q62233 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.46■□□□□ 0.71
Six3Q62233 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six3Q62233 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six3Q62233 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Six3Q62233 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six3Q62233 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.46■□□□□ 0.71
Six3Q62233 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.46■□□□□ 0.71
Six3Q62233 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.46■□□□□ 0.71
Six3Q62233 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Six3Q62233 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six3Q62233 Gm9870-201ENSMUST00000063874 645 ntBASIC19.46■□□□□ 0.71
Six3Q62233 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.46■□□□□ 0.71
Six3Q62233 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Six3Q62233 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six3Q62233 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Six3Q62233 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six3Q62233 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six3Q62233 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.45■□□□□ 0.7
Six3Q62233 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six3Q62233 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Six3Q62233 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six3Q62233 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Six3Q62233 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six3Q62233 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Six3Q62233 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six3Q62233 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Six3Q62233 Etf1-202ENSMUST00000180351 108 ntBASIC19.44■□□□□ 0.7
Six3Q62233 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six3Q62233 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six3Q62233 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six3Q62233 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six3Q62233 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Six3Q62233 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six3Q62233 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six3Q62233 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six3Q62233 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.43■□□□□ 0.7
Six3Q62233 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six3Q62233 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six3Q62233 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Six3Q62233 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six3Q62233 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six3Q62233 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six3Q62233 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Six3Q62233 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six3Q62233 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six3Q62233 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six3Q62233 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Six3Q62233 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Six3Q62233 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.42■□□□□ 0.7
Six3Q62233 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Six3Q62233 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Six3Q62233 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Six3Q62233 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.41■□□□□ 0.7
Six3Q62233 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.41■□□□□ 0.7
Six3Q62233 Gm9959-201ENSMUST00000068277 390 ntBASIC19.41■□□□□ 0.7
Six3Q62233 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six3Q62233 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Six3Q62233 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Six3Q62233 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Six3Q62233 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Six3Q62233 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Six3Q62233 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Six3Q62233 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.4■□□□□ 0.7
Six3Q62233 Gm43530-201ENSMUST00000195920 274 ntBASIC19.4■□□□□ 0.7
Six3Q62233 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms