Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.49□□□□□ -0.09
Foxc1Q61572 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Foxc1Q61572 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.49□□□□□ -0.09
Foxc1Q61572 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.49□□□□□ -0.09
Foxc1Q61572 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxc1Q61572 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxc1Q61572 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Foxc1Q61572 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxc1Q61572 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Foxc1Q61572 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Serp2-204ENSMUST00000228055 705 ntBASIC14.48□□□□□ -0.09
Foxc1Q61572 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Foxc1Q61572 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Foxc1Q61572 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.48□□□□□ -0.09
Foxc1Q61572 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Foxc1Q61572 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.47□□□□□ -0.09
Foxc1Q61572 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Foxc1Q61572 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.47□□□□□ -0.09
Foxc1Q61572 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxc1Q61572 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Foxc1Q61572 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxc1Q61572 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.46□□□□□ -0.09
Foxc1Q61572 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxc1Q61572 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxc1Q61572 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxc1Q61572 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Foxc1Q61572 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.46□□□□□ -0.09
Foxc1Q61572 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Foxc1Q61572 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Foxc1Q61572 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Foxc1Q61572 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Foxc1Q61572 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Foxc1Q61572 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxc1Q61572 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Foxc1Q61572 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Foxc1Q61572 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Foxc1Q61572 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxc1Q61572 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxc1Q61572 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.45□□□□□ -0.1
Foxc1Q61572 Gm43530-201ENSMUST00000195920 274 ntBASIC14.45□□□□□ -0.1
Foxc1Q61572 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.45□□□□□ -0.1
Foxc1Q61572 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Foxc1Q61572 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxc1Q61572 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxc1Q61572 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxc1Q61572 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Foxc1Q61572 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Foxc1Q61572 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxc1Q61572 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Foxc1Q61572 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Foxc1Q61572 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.44□□□□□ -0.1
Foxc1Q61572 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.44□□□□□ -0.1
Foxc1Q61572 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Foxc1Q61572 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxc1Q61572 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.43□□□□□ -0.1
Foxc1Q61572 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Foxc1Q61572 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxc1Q61572 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxc1Q61572 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxc1Q61572 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxc1Q61572 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxc1Q61572 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxc1Q61572 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxc1Q61572 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxc1Q61572 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Foxc1Q61572 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.43□□□□□ -0.1
Foxc1Q61572 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxc1Q61572 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxc1Q61572 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxc1Q61572 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Foxc1Q61572 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Foxc1Q61572 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Foxc1Q61572 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms