Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1eQ61290 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1eQ61290 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1eQ61290 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cacna1eQ61290 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.81■□□□□ 0.76
Cacna1eQ61290 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1eQ61290 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1eQ61290 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1eQ61290 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cacna1eQ61290 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1eQ61290 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1eQ61290 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1eQ61290 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1eQ61290 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cacna1eQ61290 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.79■□□□□ 0.76
Cacna1eQ61290 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.79■□□□□ 0.76
Cacna1eQ61290 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1eQ61290 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cacna1eQ61290 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1eQ61290 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1eQ61290 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1eQ61290 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1eQ61290 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cacna1eQ61290 Mir6236-201ENSMUST00000184437 123 ntBASIC19.78■□□□□ 0.76
Cacna1eQ61290 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cacna1eQ61290 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1eQ61290 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.77■□□□□ 0.76
Cacna1eQ61290 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1eQ61290 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1eQ61290 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1eQ61290 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cacna1eQ61290 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cacna1eQ61290 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1eQ61290 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1eQ61290 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.77■□□□□ 0.76
Cacna1eQ61290 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cacna1eQ61290 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Cacna1eQ61290 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cacna1eQ61290 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.76■□□□□ 0.75
Cacna1eQ61290 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1eQ61290 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.76■□□□□ 0.75
Cacna1eQ61290 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.75■□□□□ 0.75
Cacna1eQ61290 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacna1eQ61290 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacna1eQ61290 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacna1eQ61290 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.74■□□□□ 0.75
Cacna1eQ61290 Gm9988-201ENSMUST00000069786 435 ntBASIC19.74■□□□□ 0.75
Cacna1eQ61290 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1eQ61290 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1eQ61290 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1eQ61290 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1eQ61290 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Cacna1eQ61290 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.74■□□□□ 0.75
Cacna1eQ61290 Gm13148-201ENSMUST00000118892 745 ntBASIC19.74■□□□□ 0.75
Cacna1eQ61290 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1eQ61290 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1eQ61290 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.73■□□□□ 0.75
Cacna1eQ61290 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cacna1eQ61290 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1eQ61290 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1eQ61290 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1eQ61290 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1eQ61290 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1eQ61290 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1eQ61290 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1eQ61290 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1eQ61290 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1eQ61290 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1eQ61290 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1eQ61290 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms