Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5d-4Q5R1F6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav5d-4Q5R1F6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5d-4Q5R1F6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5d-4Q5R1F6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5d-4Q5R1F6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5d-4Q5R1F6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5d-4Q5R1F6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.12■□□□□ 0.33
Trav5d-4Q5R1F6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Trav5d-4Q5R1F6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5d-4Q5R1F6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav5d-4Q5R1F6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav5d-4Q5R1F6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav5d-4Q5R1F6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav5d-4Q5R1F6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav5d-4Q5R1F6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav5d-4Q5R1F6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav5d-4Q5R1F6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav5d-4Q5R1F6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5d-4Q5R1F6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5d-4Q5R1F6 Gm43530-201ENSMUST00000195920 274 ntBASIC17.08■□□□□ 0.32
Trav5d-4Q5R1F6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5d-4Q5R1F6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5d-4Q5R1F6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5d-4Q5R1F6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5d-4Q5R1F6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5d-4Q5R1F6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5d-4Q5R1F6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5d-4Q5R1F6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5d-4Q5R1F6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav5d-4Q5R1F6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms