Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.44■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms