Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2bQ56A07 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Scn2bQ56A07 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2bQ56A07 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2bQ56A07 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2bQ56A07 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2bQ56A07 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.72■□□□□ 0.75
Scn2bQ56A07 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Scn2bQ56A07 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2bQ56A07 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2bQ56A07 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2bQ56A07 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2bQ56A07 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2bQ56A07 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2bQ56A07 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.71■□□□□ 0.75
Scn2bQ56A07 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scn2bQ56A07 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2bQ56A07 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scn2bQ56A07 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2bQ56A07 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2bQ56A07 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.69■□□□□ 0.74
Scn2bQ56A07 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.69■□□□□ 0.74
Scn2bQ56A07 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2bQ56A07 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2bQ56A07 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2bQ56A07 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2bQ56A07 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2bQ56A07 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2bQ56A07 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Scn2bQ56A07 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2bQ56A07 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2bQ56A07 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2bQ56A07 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.67■□□□□ 0.74
Scn2bQ56A07 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2bQ56A07 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2bQ56A07 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2bQ56A07 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn2bQ56A07 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn2bQ56A07 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.64■□□□□ 0.74
Scn2bQ56A07 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn2bQ56A07 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.64■□□□□ 0.73
Scn2bQ56A07 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn2bQ56A07 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn2bQ56A07 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn2bQ56A07 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn2bQ56A07 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn2bQ56A07 Gm7143-201ENSMUST00000222811 859 ntBASIC19.63■□□□□ 0.73
Scn2bQ56A07 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Scn2bQ56A07 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn2bQ56A07 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
Scn2bQ56A07 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn2bQ56A07 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2bQ56A07 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2bQ56A07 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2bQ56A07 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2bQ56A07 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.62■□□□□ 0.73
Scn2bQ56A07 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.62■□□□□ 0.73
Scn2bQ56A07 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2bQ56A07 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2bQ56A07 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms