Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp560Q3URI6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.95■□□□□ 0.78
Zfp560Q3URI6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp560Q3URI6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.95■□□□□ 0.78
Zfp560Q3URI6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zfp560Q3URI6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zfp560Q3URI6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zfp560Q3URI6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Zfp560Q3URI6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zfp560Q3URI6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zfp560Q3URI6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Zfp560Q3URI6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zfp560Q3URI6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Zfp560Q3URI6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zfp560Q3URI6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zfp560Q3URI6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zfp560Q3URI6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Zfp560Q3URI6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zfp560Q3URI6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zfp560Q3URI6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zfp560Q3URI6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zfp560Q3URI6 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.92■□□□□ 0.78
Zfp560Q3URI6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zfp560Q3URI6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
Zfp560Q3URI6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zfp560Q3URI6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Zfp560Q3URI6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zfp560Q3URI6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Zfp560Q3URI6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
Zfp560Q3URI6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zfp560Q3URI6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Zfp560Q3URI6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Gm12821-201ENSMUST00000120022 600 ntBASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Gm43137-201ENSMUST00000198052 594 ntBASIC19.9■□□□□ 0.78
Zfp560Q3URI6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.9■□□□□ 0.78
Zfp560Q3URI6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Zfp560Q3URI6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zfp560Q3URI6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Zfp560Q3URI6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zfp560Q3URI6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zfp560Q3URI6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Zfp560Q3URI6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.88■□□□□ 0.77
Zfp560Q3URI6 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.88■□□□□ 0.77
Zfp560Q3URI6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Zfp560Q3URI6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Zfp560Q3URI6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zfp560Q3URI6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zfp560Q3URI6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zfp560Q3URI6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zfp560Q3URI6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Zfp560Q3URI6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zfp560Q3URI6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Zfp560Q3URI6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Zfp560Q3URI6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 310.1 ms