Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa3Q3UPR0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa3Q3UPR0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 Gm15546-201ENSMUST00000122095 826 ntBASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa3Q3UPR0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shisa3Q3UPR0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa3Q3UPR0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa3Q3UPR0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa3Q3UPR0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa3Q3UPR0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa3Q3UPR0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa3Q3UPR0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Shisa3Q3UPR0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa3Q3UPR0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa3Q3UPR0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Shisa3Q3UPR0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa3Q3UPR0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Shisa3Q3UPR0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa3Q3UPR0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Shisa3Q3UPR0 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.13■□□□□ 0.33
Shisa3Q3UPR0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Shisa3Q3UPR0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa3Q3UPR0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Gm15820-201ENSMUST00000201566 728 ntBASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Shisa3Q3UPR0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa3Q3UPR0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Shisa3Q3UPR0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa3Q3UPR0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.1■□□□□ 0.33
Shisa3Q3UPR0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa3Q3UPR0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.1■□□□□ 0.33
Shisa3Q3UPR0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa3Q3UPR0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa3Q3UPR0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa3Q3UPR0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa3Q3UPR0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms